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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900636.1_cds_XP_016450640.1_45071
CDS Infomation

[gene=LOC107775427] [db_xref=GeneID:107775427] [protein=splicing factor 3B subunit 3-like] [protein_id=XP_016450640.1] [location=join(87408..87590,94128..94262,94347..94426,94565..94648,94780..94867,94969..95123,95295..96357,97887..98009,98963..99102,100129..100237,100930..101127)] [gbkey=CDS]
Sequence

ATGGCGGTTTCGGAGGAAGAATCCTCGTCTTCATCCTCTGCCGGTTGCAGCAGCAAGTCA
CGATCAGCTGCTCCTCGTGGCGCCTCTTATTTAGCTAAGACTGTTCTCAGAGGTAGTGTT
GTTCTGCAAGTCGTTTATGGCCGTATCCGCTCTTCTACTTCGTACGACGTCGTTCTTGGC
AAGGAAACATCTGTAGAGTTGGTGATTATAGATGAAGATGGAATTGTGCAATCTATCTGT
GAGCAGCCTGTATTTGGCATAATAAAAGATATAGCTGTGCTGCCCTGGAATGAGAAGTTT
CGTGCTGGAAGCCCGCAGCTTTTGAGCAAGGATCTCCTGGTTGTTATTTCGGATTCAGGG
AAGCTCTCAGTTCTCAGATTTTGCAATGAAATGCACAGGTTTTTCGCTGTAACACATGTT
CAACTTTCATCTCCTGGAAATCCAAGGCATCAAATTGGAAGGATGTTGGCTATTGATTCC
AGTGGCTGTTTCATTGCTGCTAGTGCATATGAAGACAGATTGGCTCTTTTCTCCCGCTCT
GCTTCAGCTGGCAGTGATATACTTGATAAGAGAATCTTTTGTCCCACTGACAATCAAGGG
AAGATTGGGACTGCCAGTGGTTTCACCAGTATCTGTGGTACCATATGGAGCATGTGCTTC
ATCTCAACAGATGTTCGTCAACCAAATAAGGAGCACAATCCTGTATTGGCCATTCTTCTG
AATAGGAGGAGATCATATAGGACTGAGCTCATGTTGATAGAGTGGAATATGAAGGAGCAT
TCACTCCATGTAATATATCAGTATTCTGAACCTGGACCACTAGCACATCATATCATAGAA
GTTCCTCATTCTTATGGAATCCTGTTAGTATTTCGTGCTGGGGATGCTATTGTGATGGAC
TTTAGAGATCCTCACAACCCTTGTTTTCTTTATCGAATAAGTTTAAATTTTACACCACCT
TCAGTTGAGGAGCAGAATTTTGTAGAAGAGGCTATTAGAATTCCTGATATTATTGACGAA
GACGGTATGTATAGCGTTGCTGCATCTGCATTGCTTGAGCTTAGCGACTTGAATAAAAAT
GACCCAATGAACATTGACGATGATAGCAATGTAAAACCGGGTTCAAATTTTGTCTGCTCA
TGGAGTTGGAATCCTGGAAATGAGCACAGTCCTAGGATGATATTTTGTGCTGATTCTGGA
GAGCTTTTCCTGATTGATTTTTTATTTGATTCTGATGGCCTGAAAATATCTCTGTCTGAT
TGTCTTTACAAGACTCAACCAGCCAAGGCACTTTTGTGGGTGAGAGGTGGGTTTTTGGCA
GTTATCATTGAGATGGGTGATGGGATGGTGTTAAAAGTTGAAGAGGGAAAACTTGTTTAT
AGAAGTCCAATCCAAAATATCGCACCAATATTGGATATGTCCGTTGTGGATTACCATGAT
GAGAAACATGATCAAATGTTTGCCTGCTGTGGGATGGCACCTGAAGGATCTTTACGAGTT
ATACGCAGTGGCATCAGTGTAGAGAAATTGTTGAAAACTGCTCCTATTTATCAGGGTATT
ACTGGAACTTGGACAGTGAAAATGAAAATGGCTGATTCTTATCATTCTTTCCTTGTACTA
TCATTTGTTGAAGAGACCAGGGTTCTATCTGTTGGTGTGAGCTTTTCTGATGTAACTGAC
TTCATGGGTTTCCAGCCGGATGTTTGCACGTTGGCTTGTGGTCTTGTGGGCGATGGTTTA
CTGGTGCAAATCCACCAGACTGCTGTGAGACTGTGTGTACCTACTATTTTTAAATCCTTT
ACTTGTTTTTTGAAAATATGGCTTTGTTTTACAGATAATTCCAGTCCAGAATGCAATCTA
GCTCTAACTTGTTCATTCTACATGGGTGAGATAGCTATGAGAGTTCGAAAGGGGTCATTC
TCTTATAAACTTCCAGCAGATGATGCACTTAAGGGCTGTCAAGTTGCCAGCAATGTCGGT
GACATATCACAAAATAGTATCATGGCTAGTACACTTTTAGGGAGCATAATTATTTTCATT
CCTCTTACTAGGGAGGAATATGATCTCTTAGAAGCGGTACAGGCTAGGCTTGTCATCCAT
CCATTGACTGCTCCTATATTGGGAAATGACCACGCTGAATTTCGCTGTCGTGGGAGTCTG
GCTAGGGCACCTAAAGCTCTGGATGGTGATATGCTTGCTCAGTTCTTGGAGCTTACTAGT
ATGCAACAAGAAGCTGTATTAGCATTGCCTCTTGGTGCACAAAACACGATTACGTTCAAT
TCAAAGCAATCTCCTCCTCCAATTACTGTCAATCAGGTTGTGCGGCTGCTAGAACGTGTT
CATTATGCCCTGAACTGA

Peptide Sequence

PEP ID

XP_016450640.1
PEP Infomation

PREDICTED: splicing factor 3B subunit 3-like [Nicotiana tabacum]
Sequence

MAVSEEESSSSSSAGCSSKSRSAAPRGASYLAKTVLRGSVVLQVVYGRIRSSTSYDVVLG
KETSVELVIIDEDGIVQSICEQPVFGIIKDIAVLPWNEKFRAGSPQLLSKDLLVVISDSG
KLSVLRFCNEMHRFFAVTHVQLSSPGNPRHQIGRMLAIDSSGCFIAASAYEDRLALFSRS
ASAGSDILDKRIFCPTDNQGKIGTASGFTSICGTIWSMCFISTDVRQPNKEHNPVLAILL
NRRRSYRTELMLIEWNMKEHSLHVIYQYSEPGPLAHHIIEVPHSYGILLVFRAGDAIVMD
FRDPHNPCFLYRISLNFTPPSVEEQNFVEEAIRIPDIIDEDGMYSVAASALLELSDLNKN
DPMNIDDDSNVKPGSNFVCSWSWNPGNEHSPRMIFCADSGELFLIDFLFDSDGLKISLSD
CLYKTQPAKALLWVRGGFLAVIIEMGDGMVLKVEEGKLVYRSPIQNIAPILDMSVVDYHD
EKHDQMFACCGMAPEGSLRVIRSGISVEKLLKTAPIYQGITGTWTVKMKMADSYHSFLVL
SFVEETRVLSVGVSFSDVTDFMGFQPDVCTLACGLVGDGLLVQIHQTAVRLCVPTIFKSF
TCFLKIWLCFTDNSSPECNLALTCSFYMGEIAMRVRKGSFSYKLPADDALKGCQVASNVG
DISQNSIMASTLLGSIIIFIPLTREEYDLLEAVQARLVIHPLTAPILGNDHAEFRCRGSL
ARAPKALDGDMLAQFLELTSMQQEAVLALPLGAQNTITFNSKQSPPPITVNQVVRLLERV
HYALN

Transcript Sequence

Gene sequence data has not been registered.